H3VNWAFXY_n02_adR3wtZT14s74.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n02_adR3wtZT14s74.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	255566
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1833	0.717231556623338	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1094	0.4280694615089644	No Hit
GTGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	812	0.31772614510537395	No Hit
CGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	698	0.27311927251668844	No Hit
GAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	532	0.20816540541386572	No Hit
CTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	441	0.17255816501412552	No Hit
GATCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	408	0.15964564926476918	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	377	0.14751571022749507	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	363	0.14203767324291963	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	318	0.1244296972210701	No Hit
GAGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	289	0.11308233489587818	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	287	0.11229975818379596	No Hit
GACGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	269	0.10525656777505615	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAG	265	0.10369141435089176	No Hit
GTCTTGTACCGACGACAGATCTTTCAAATGTCTGCCCTATCAACTTTTGA	264	0.10330012599485065	No Hit
GCACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	262	0.10251754928276843	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCGGAA	45	1.7033435E-6	46.57052	2
GTCTGGA	40	4.638335E-5	43.65986	2
TTACACT	40	4.638335E-5	43.65986	4
TTTCGGA	50	3.5170942E-6	41.913464	1
TAGTGTA	125	3.6379788E-12	33.664547	70
AAGTAGT	45	0.004265359	31.163563	61
TGCGGTG	60	5.0243957E-4	29.113379	10
AGTGTAG	75	5.5035125E-5	28.047209	69
CGTGTTT	50	0.0072537074	27.955378	16
ACTGCTC	50	0.0072619957	27.948841	8
CCTGTAG	50	0.007270291	27.94231	3
TACACCG	75	5.645924E-5	27.94231	5
TGGATAA	90	6.1091705E-6	27.242552	42
ATACGTC	65	8.034276E-4	26.867605	3
GTTACTT	105	6.716982E-7	26.674078	36
TAACAGT	95	9.382044E-6	25.778519	31
CTGCGGT	70	0.001236402	24.954323	9
CCTTACA	70	0.0012380889	24.94849	2
GTCTAGG	70	0.0012380889	24.94849	1
TAGGAGA	70	0.0012380889	24.94849	4