H3VNWAFXY_n02_adR3wtZT14s67.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n02_adR3wtZT14s67.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	524176
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3270	0.6238362687341656	No Hit
GTGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1460	0.2785324013308507	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1251	0.23866029730472207	No Hit
GAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1024	0.19535423216629527	No Hit
CGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1014	0.19344647599279632	No Hit
CTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	802	0.15300204511461798	No Hit
GATCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	756	0.1442263667165227	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATT	583	0.11122218491499039	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	572	0.1091236531241415	No Hit
GAGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	550	0.10492658954244377	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGTATA	45	0.00435016	31.045681	1
GTATATC	45	0.00435016	31.045681	1
TTAGACT	60	5.041053E-4	29.105328	4
AGAAACG	210	0.0	28.38722	67
GGTCCAA	160	1.8189894E-12	28.380936	11
CCTAGGT	50	0.007143017	28.050034	65
ACCCCTA	50	0.007155021	28.040388	53
TCTAGCG	75	5.6564953E-5	27.944307	8
TCTAACG	50	0.0072800014	27.941114	3
CTAGGAC	295	0.0	27.23075	3
GAGAAAC	220	0.0	27.096891	66
GGAATCA	285	0.0	27.01626	34
TCTAGGA	340	0.0	26.708418	2
TAGGACT	290	0.0	26.495884	4
TTCCGGA	295	0.0	26.13635	49
GGGTAAC	285	0.0	25.767609	25
AGGACTA	300	0.0	25.61269	5
GGTAACG	290	0.0	25.32334	26
TAACGGG	295	0.0	24.899826	28
AACGGGT	310	0.0	24.80914	22