H3VNWAFXY_n02_adR3wtZT14s58.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n02_adR3wtZT14s58.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	210194
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1884	0.8963148329638335	No Hit
GTGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	591	0.28116882499024715	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	460	0.21884544753894022	No Hit
CTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	431	0.20504866932452878	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	384	0.18268837359772402	No Hit
GATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	233	0.11084997668820233	No Hit
GATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	216	0.10276221014871975	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAAAGC	15	0.00223556	69.890816	6
CCGCATT	25	2.3870745E-4	55.992252	29
ATCCGAC	20	0.006930444	52.52265	43
CTGGCCG	35	2.0994958E-5	49.92201	9
ATCTGGC	70	3.8744474E-10	44.92981	7
ATCTGGG	175	0.0	41.93449	7
GATCTTT	60	2.6149246E-7	40.76964	6
GATCTGG	345	0.0	39.5035	6
CGGGAAC	90	1.05501385E-10	38.850323	15
TTAGGTG	55	6.6471293E-6	38.19829	45
TCTGTGC	55	6.7387173E-6	38.122265	8
CGATCTG	1035	0.0	37.140045	5
CGATCTA	565	0.0	37.11017	5
CGCGGTG	40	0.002408769	35.0151	52
TTCCGAT	2485	0.0	35.005768	2
TCTGCAG	40	0.0024256562	34.965294	10
CGGGTGT	40	0.0024256562	34.965294	15
TCTGGCC	50	1.7203226E-4	34.945404	8
TCCGATC	2535	0.0	34.31532	3
CCGATCT	2535	0.0	34.31532	4