H3VNWAFXY_n02_adR3wtZT14s49.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n02_adR3wtZT14s49.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	452734
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4106	0.9069343146306662	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3034	0.6701506845079008	No Hit
GTGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1341	0.2962004179054368	No Hit
CTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	947	0.2091735986252413	No Hit
GGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	543	0.11993797682524397	No Hit
GTCCTGGGCTGCACGCGCGCTACAATGAAAGTATCAACGTGTATTTCCTA	516	0.11397421002177878	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	474	0.10469723943861076	No Hit
GATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	461	0.10182579616286826	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTGAGT	55	6.768061E-6	38.11512	8
TTCCGAT	4785	0.0	36.649937	2
CGATCTG	2170	0.0	36.22215	5
CCGATCT	4835	0.0	35.98192	4
TCCGATC	4895	0.0	35.754974	3
CCACTAG	40	0.0024036963	35.040546	57
AAACACT	40	0.002436638	34.943466	16
TCTTGTC	40	0.0024382155	34.93886	8
GTGTTAA	50	1.7273107E-4	34.934254	1
TAGACTG	40	0.002439794	34.934254	5
TCTAGAC	80	6.336268E-8	34.934254	3
CGATCTA	900	0.0	34.157936	5
CTTCCGA	5350	0.0	32.84473	1
TAATATT	65	2.1275036E-5	32.247005	4
CGATCTT	870	0.0	32.123447	5
GATCTGG	1070	0.0	31.34288	6
GATCTTG	320	0.0	30.56747	6
ATCTGGT	185	0.0	30.213408	7
CGATCTC	1290	0.0	29.788897	5
GGGTCAC	60	5.0253916E-4	29.119558	16