H3VNWAFXY_n02_adR3wtZT14s42.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n02_adR3wtZT14s42.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	326560
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	2976	0.9113179813816756	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2135	0.6537849093581577	No Hit
GTGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1170	0.3582802547770701	No Hit
CTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	684	0.2094561489465948	No Hit
GGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	493	0.15096766291033806	No Hit
GAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	487	0.14913032827045566	No Hit
CGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	445	0.1362689857912788	No Hit
GATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	341	0.104421852033317	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCTAGG	20	0.007011546	52.37617	10
CCTTACA	55	1.3360295E-7	44.424084	2
TTTCGGA	80	1.4551915E-9	39.26772	1
TACCATA	40	0.0024028344	35.03958	49
CTGCTAG	40	0.0024465579	34.91104	9
TAATACT	60	1.2360388E-5	34.90464	4
TTACACT	65	2.137686E-5	32.21967	4
TCCTATA	45	0.0043605827	31.026346	1
ATCTGTG	150	0.0	30.256237	7
ATCACTC	60	5.049099E-4	29.092535	8
ACTGTAG	60	5.049099E-4	29.092535	8
TCTGTCC	85	4.02337E-6	28.75027	8
CTTACAC	115	5.0065864E-8	27.316675	3
TCTGTGC	90	6.275859E-6	27.15303	8
TCTGGCC	105	6.896389E-7	26.598888	8
TCTGTGT	80	8.797838E-5	26.18328	8
ACCTTAC	110	1.0365111E-6	25.385191	1
ACTGAAT	125	1.12106136E-7	25.13595	8
ACCTAAG	70	0.0012437803	24.931885	1
TGTAACG	70	0.0012437803	24.931885	2