H3VNWAFXY_n02_adR3wtZT14s41.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n02_adR3wtZT14s41.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	442991
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3834	0.8654803370723108	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1879	0.42416211616037347	No Hit
GTGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1445	0.3261917285001275	No Hit
CTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	888	0.2004555397287981	No Hit
GAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	602	0.13589440869001854	No Hit
CGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	551	0.12438175944883756	No Hit
GATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	448	0.1011307227460603	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATATA	25	2.4061279E-4	55.91863	1
ATCTGAG	220	0.0	31.77195	7
ATCTAGT	90	1.7757338E-7	31.065905	7
ATCTAGC	195	0.0	28.676224	7
CATAACT	50	0.0071932888	28.008627	34
TCTGAGC	100	4.4673834E-7	27.959314	8
GTCAGAC	50	0.0072554457	27.959314	2
TTGCAAG	50	0.0072554457	27.959314	13
CTAGCAG	50	0.0072554457	27.959314	9
GTACTGG	140	4.0017767E-10	27.460045	1
TTTCGGA	115	4.955109E-8	27.351507	1
TCTGTCA	115	4.955109E-8	27.351507	8
ACTATAG	90	6.2307117E-6	27.182667	3
TACTAGT	70	0.0012354044	24.963676	2
GTCGCTA	85	1.2943533E-4	24.740345	69
TACTGGT	85	1.3196313E-4	24.669985	2
CGATCTG	2630	0.0	24.318226	5
ATCTGTG	235	0.0	23.795164	7
ACACTAC	75	0.0018317336	23.331028	30
ACTGCTC	75	0.0018462354	23.29943	8