H3VNWAFXY_n01_adR3wtZT14s92.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adR3wtZT14s92.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	531411
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGT	2375	0.44692337945582605	No Hit
ATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTT	1246	0.23447011823240393	No Hit
ACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTTCT	592	0.11140153290014695	Illumina PCR Primer Index 7 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACAATA	20	0.0069452254	52.509106	2
GAGTCTA	40	0.002418442	34.99948	18
TCCTACA	115	4.0017767E-11	33.484066	2
CTCGTAT	570	0.0	32.54338	39
TAATAGT	45	0.0043067094	31.110651	68
TTTCGGA	300	0.0	30.33574	1
GTATGCC	615	0.0	30.162157	42
TATGCTT	60	4.978417E-4	29.168982	5
TCGTATG	640	0.0	28.983946	40
TGCTTGA	645	0.0	28.759266	55
GCTTGAA	645	0.0	28.759266	56
GCCGTCT	645	0.0	28.759266	46
GTCTTCT	635	0.0	28.660994	49
CTTGAAA	670	0.0	28.20854	57
TCCATAG	50	0.0072008357	28.004856	2
ATAGACT	50	0.0072008357	28.004856	4
TACTAAT	50	0.0072008357	28.004856	2
GTATGTA	50	0.007204145	28.002222	1
AAGTAAT	50	0.0072074556	27.999586	65
TCTTTTT	1415	0.0	27.952745	8