H3VNWAFXY_n01_adR3wtZT14s50.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adR3wtZT14s50.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	230312
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT	1427	0.6195942894855674	No Hit
ATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTT	825	0.35820973288408764	TruSeq Adapter, Index 7 (95% over 21bp)
ACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTTCT	366	0.15891486331584978	RNA PCR Primer, Index 7 (95% over 23bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACT	20	0.006945102	52.499836	14
CCTAAGA	45	1.6799186E-6	46.666523	2
ATATTGC	35	0.0012536984	39.999878	51
ATCTTTG	55	6.6760567E-6	38.1817	7
TTCGTTT	50	1.7062787E-4	34.999893	17
CAATTTT	50	1.7062787E-4	34.999893	34
TCTACAA	40	0.0024154691	34.99989	8
TCACTCG	40	0.0024154691	34.99989	9
TGGTCAT	40	0.0024154691	34.99989	10
TCTGTGC	95	7.588824E-9	33.15779	8
TTTCGGA	195	0.0	32.314606	1
CCTAGGG	45	0.0043014456	31.111015	2
ATTAATT	45	0.0043014456	31.111015	3
CTAAGAT	45	0.0043014456	31.111015	3
CACTCGG	45	0.0043014456	31.111015	10
GACTCTG	45	0.0043014456	31.111015	65
ATCTGTG	135	7.2759576E-12	31.111015	7
GTAAACA	45	0.0043014456	31.111015	44
TACAAGT	45	0.0043014456	31.111015	4
GTCTTCT	310	0.0	29.354748	49