H3VNWAFXY_n01_adR3wtZT14s49.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adR3wtZT14s49.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	452734
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT	1477	0.3262401321747428	No Hit
ATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTT	775	0.1711821952846484	TruSeq Adapter, Index 7 (95% over 21bp)
GACGTAATCAATGCGAGTTAATGACTCACACTTACTGGGAATTCCAAGTT	600	0.13252815118811487	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	600	0.13252815118811487	No Hit
GTCCTGGGCTGCACGCGCGCTACAATGAAAGTATCAACGTGTATTTCCTA	532	0.11750829405346186	No Hit
TTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCACTTTCATGCTTGG	474	0.10469723943861076	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATTAT	35	0.0012538724	40.00707	1
CGATCTA	1070	0.0	35.013924	5
CGATCTG	2555	0.0	33.98612	5
TTCCGAT	6140	0.0	33.81638	2
CCGATCT	6135	0.0	33.501507	4
TCCGATC	6250	0.0	33.165188	3
TCTGTCC	75	1.4858524E-6	32.676052	8
CTTCCGA	6410	0.0	32.384815	1
CTCGTAT	415	0.0	32.046776	39
GATCTAG	405	0.0	31.123487	6
AGTAATA	45	0.004306661	31.109735	63
CTGTGCG	80	2.4650944E-6	30.623646	9
TCTTCTG	435	0.0	30.573362	50
GTATGCC	435	0.0	30.573362	42
GATCTGG	1300	0.0	30.43518	6
GCTTGAA	455	0.0	29.229479	56
TCCTAGG	60	4.967996E-4	29.178267	2
CATAAAG	60	4.967996E-4	29.178267	3
TCTACTC	60	4.9712113E-4	29.175045	8
TTCTAAT	60	4.974428E-4	29.171822	1