H3VNWAFXY_n01_adR3wtZT14s45.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3VNWAFXY_n01_adR3wtZT14s45.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	328688
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	709	0.21570607992990312	No Hit
CTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGC	602	0.18315241201382465	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	573	0.1743294552889062	No Hit
CGTCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCAC	466	0.14177578737282773	No Hit
ATCTAGACGTGTGCTCTTCCGATCTAGACGTGTGCTCTTCCGATCTAGAC	438	0.13325707053497543	Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
CTTATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGT	425	0.1293019520031154	No Hit
CGTCTAGATCGGAAGAGCACACGTCTAGATCGGAAGAGCACACGTCTAGA	408	0.1241298739229908	Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCATAAA	15	0.0022235448	69.99954	11
ATGCACT	40	4.5877885E-5	43.749714	4
CTCGTAT	70	1.9212166E-8	39.999737	39
GCGTCTA	35	0.0012545014	39.999737	38
CTAGCGC	40	0.0024170058	34.99977	9
ATCCTAC	55	2.9836202E-4	31.82766	1
TAGTGCG	45	0.004304168	31.110907	17
GTATGCC	110	3.1710442E-8	28.636177	42
TACTAAG	75	5.570582E-5	28.004076	2
GTTAGAA	50	0.0072032264	27.999817	37
GTCTAGT	50	0.0072032264	27.999817	40
CACTATG	50	0.0072032264	27.999817	51
AGTACCA	75	5.576362E-5	27.999817	5
CGGACTA	50	0.0072032264	27.999817	61
GATCTTT	770	0.0	27.727093	6
CCTACAC	115	4.8825314E-8	27.391127	3
TCTTTTT	695	0.0	27.194067	8
TTAGAAC	65	7.947484E-4	26.922901	38
CGTTATT	120	7.376548E-8	26.249828	10
ACTGTCC	80	8.6525804E-5	26.249828	8