[2018-08-04 06:28:20,653] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/20170330/intel/lib/python2.7/site-packages/multiqc-1.0.dev0-py2.7.egg/multiqc_config.yaml [2018-08-04 06:28:20,678] multiqc [DEBUG ] No MultiQC config found: /home/mk5636/.multiqc_config.yaml [2018-08-04 06:28:20,678] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2018-08-04 06:28:20,681] multiqc [DEBUG ] Loading config settings from: /beegfs/mk5636/scripts/mqc_config.yaml [2018-08-04 06:28:20,681] multiqc [DEBUG ] New config 'report_section_order': {'demux_report': {'after': 'run_stats'}} [2018-08-04 06:28:20,681] multiqc [DEBUG ] Command used: /share/apps/multiqc/20170330/intel/bin/multiqc -f -c /beegfs/mk5636/scripts/mqc_config.yaml /beegfs/mk5636/logs/html/H3VL5AFXY/merged [2018-08-04 06:28:20,681] multiqc [DEBUG ] Could not connect to multiqc.info for version check [2018-08-04 06:28:20,681] multiqc [INFO ] This is MultiQC v1.0.dev0 [2018-08-04 06:28:20,681] multiqc [DEBUG ] Command : /share/apps/multiqc/20170330/intel/bin/multiqc -f -c /beegfs/mk5636/scripts/mqc_config.yaml /beegfs/mk5636/logs/html/H3VL5AFXY/merged [2018-08-04 06:28:20,681] multiqc [DEBUG ] Working dir : /beegfs/mk5636/logs/html/H3VL5AFXY/merged [2018-08-04 06:28:20,681] multiqc [INFO ] Template : default [2018-08-04 06:28:20,682] multiqc [DEBUG ] Running in --force mode, will overwrite any existing reports. [2018-08-04 06:28:20,682] multiqc [INFO ] Searching '/beegfs/mk5636/logs/html/H3VL5AFXY/merged' [2018-08-04 06:28:20,682] multiqc [DEBUG ] Analysing modules: rna_seqc, custom_content, peddy, methylQA, qualimap, preseq, quast, rseqc, busco, goleft_indexcov, snpeff, gatk, htseq, bcftools, featureCounts, picard, prokka, samblaster, samtools, bamtools, bismark, hicup, salmon, kallisto, slamdunk, star, tophat, bowtie2, bowtie1, cutadapt, trimmomatic, skewer, fastq_screen, fastqc, clusterflow [2018-08-04 06:28:20,682] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-7969896/tmp15_aZm [2018-08-04 06:28:21,230] multiqc.modules.rna_seqc.rna_seqc [DEBUG ] Could not find any RNA-SeQC data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:21,373] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 193 samples (table) [2018-08-04 06:28:21,374] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2018-08-04 06:28:21,426] multiqc.modules.peddy.peddy [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:21,444] multiqc.modules.methylQA.methylQA [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:21,451] multiqc.modules.qualimap.QM_BamQC [DEBUG ] Using default Qualimap thresholds: 1, 5, 10, 30, 50 [2018-08-04 06:28:21,520] multiqc.modules.qualimap.qualimap [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:21,841] multiqc.modules.preseq.preseq [DEBUG ] Could not find any preseq data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:21,858] multiqc.modules.quast.quast [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:22,312] multiqc.modules.rseqc.rseqc [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:22,330] multiqc.modules.busco.busco [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:22,358] multiqc.modules.goleft_indexcov.goleft_indexcov [DEBUG ] Did not find goleft indexcov outputs in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:22,460] multiqc.modules.snpeff.snpeff [DEBUG ] Could not find any data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:22,562] multiqc.modules.gatk.gatk [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:22,665] multiqc.modules.htseq.htseq [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:22,767] multiqc.modules.bcftools.bcftools [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:22,784] multiqc.modules.featureCounts.feature_counts [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:23,839] multiqc.modules.picard.picard [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:23,858] multiqc.modules.prokka.prokka [DEBUG ] Could not find any Prokka data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:23,960] multiqc.modules.samblaster.samblaster [DEBUG ] Could not find any data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:24,310] multiqc.modules.samtools.samtools [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:24,421] multiqc.modules.bamtools.bamtools [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:24,485] multiqc.modules.bismark.bismark [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:24,502] multiqc.modules.hicup.hicup [DEBUG ] Could not find any HiCUP data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:24,531] multiqc.modules.salmon.salmon [DEBUG ] Could not find any Salmon data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:24,639] multiqc.modules.kallisto.kallisto [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,279] multiqc.modules.slamdunk.slamdunk [DEBUG ] No slamdunk reports found. [2018-08-04 06:28:25,308] multiqc.modules.star.star [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,326] multiqc.modules.tophat.tophat [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,434] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,538] multiqc.modules.bowtie1.bowtie1 [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,640] multiqc.modules.cutadapt.cutadapt [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,744] multiqc.modules.trimmomatic.trimmomatic [DEBUG ] Could not find any Trimmomatic data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,846] multiqc.modules.skewer.skewer [DEBUG ] Could not find any data in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,864] multiqc.modules.fastq_screen.fastq_screen [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:25,900] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E8_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,900] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,901] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C11_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,902] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,902] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C5_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,902] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,903] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G1_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,903] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,904] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H6_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,904] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,905] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H12_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,905] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,906] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B8_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,906] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,907] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C5_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,907] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,908] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A6_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,908] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,909] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D12_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,909] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,910] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C12_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,910] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,911] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B4_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,911] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,912] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C12_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,912] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,913] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F2_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,913] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,948] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H5_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,948] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,949] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F9_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,949] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,950] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F2_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,950] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,951] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C4_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,951] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,952] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C10_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,952] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,953] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E8_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,953] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,954] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G5_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,954] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,955] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H8_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,955] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,956] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C10_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,956] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,957] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D11_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,957] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,958] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D2_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,958] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,958] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D2_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,959] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,959] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E1_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,960] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,960] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H9_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,960] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,961] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A11_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,961] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,962] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C2_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,962] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,963] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A11_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,963] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,964] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E3_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,964] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,965] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G6_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,965] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,966] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F11_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,966] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,967] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F6_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,967] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,968] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A1_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,968] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,969] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G11_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,969] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,970] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A3_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,970] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,971] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B10_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,971] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,972] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A12_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,972] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,973] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F3_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,973] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,973] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G12_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,974] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,974] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F5_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,975] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,975] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G4_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,975] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,976] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C6_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,976] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,977] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F7_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,977] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,978] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D8_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,978] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,979] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E7_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,979] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,980] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D1_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,980] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,981] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B11_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,981] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,982] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A7_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,982] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,983] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D5_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,983] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,984] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H8_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,984] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,985] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E2_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,985] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,998] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F4_fastqc.zip' - Bad zip file [2018-08-04 06:28:25,999] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:25,999] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,000] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,000] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,000] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,001] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,001] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,002] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,002] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,003] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,003] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,004] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,004] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,005] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,005] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,006] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,006] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,007] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,007] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,008] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,008] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,009] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,009] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,010] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,010] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,147] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,147] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,148] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,148] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,149] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C7_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,149] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,150] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,150] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,151] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,151] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,152] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,152] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,153] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,153] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,154] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,154] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,155] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,155] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,156] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,156] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,157] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,157] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,157] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,158] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,158] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,159] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,159] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,159] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,160] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,160] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,161] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,161] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,162] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,162] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,163] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,163] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,164] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,164] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,165] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,165] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,166] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,166] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,167] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,167] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,168] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,168] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,169] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,169] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,170] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,170] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,171] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,171] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,172] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H7_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,172] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,173] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,173] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,173] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,174] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,186] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,186] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,187] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,187] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,188] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,188] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,189] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D7_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,189] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,189] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,190] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,190] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,191] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,191] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,191] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,192] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,192] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,193] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,193] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,194] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,194] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,195] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,195] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,196] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,196] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,197] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,197] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,198] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,198] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,199] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,199] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,200] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,200] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,201] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,201] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,202] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,202] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,203] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,203] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,204] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,204] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,205] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,205] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,206] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,206] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,206] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,207] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,207] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,207] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,208] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,208] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,209] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,209] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,210] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,210] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,211] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,211] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,212] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,212] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,213] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B7_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,213] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,214] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,214] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,215] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,215] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,216] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,216] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,217] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,217] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,218] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,218] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,219] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,219] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,220] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,220] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,221] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,221] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,222] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,222] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,223] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5F8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,223] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,224] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,224] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,243] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D11_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,243] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,244] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,244] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,245] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,245] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,246] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,246] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,247] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,247] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,248] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,248] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,249] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,249] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,250] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,250] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,280] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,280] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,281] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,281] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,282] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,282] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,283] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,283] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,284] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,284] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,285] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G7_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,285] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,286] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A8_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,286] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,287] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5C3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,287] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,288] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,288] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,289] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,289] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,290] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,290] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,291] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,291] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,292] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,292] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,293] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,293] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,310] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4B3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,311] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,311] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4E12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,311] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,312] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4F1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,312] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,313] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,313] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,314] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,314] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,315] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4G9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,315] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,316] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,316] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,317] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,317] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,318] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5A10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,318] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,319] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,319] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,320] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H6_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,320] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,321] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,321] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,322] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5B10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,322] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,323] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,323] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,324] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4H2_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,324] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,325] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4C1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,325] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,326] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,326] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,327] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5H4_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,327] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,328] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G1_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,328] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,329] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5G10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,329] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,330] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5D3_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,330] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,330] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4A12_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,331] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,331] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D10_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,331] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,332] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p4D9_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,332] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,333] multiqc.modules.fastqc.fastqc [WARNING] Couldn't read 'H3VL5AFXY_n01_p5E5_fastqc.zip' - Bad zip file [2018-08-04 06:28:26,333] multiqc.modules.fastqc.fastqc [DEBUG ] Bad zip file error: File is not a zip file [2018-08-04 06:28:26,334] multiqc.modules.fastqc.fastqc [INFO ] Found 9 reports [2018-08-04 06:28:27,819] multiqc.modules.clusterflow.clusterflow [DEBUG ] Could not find any reports in ('/beegfs/mk5636/logs/html/H3VL5AFXY/merged',) [2018-08-04 06:28:27,834] multiqc [INFO ] Report : multiqc_report.html [2018-08-04 06:28:27,835] multiqc [INFO ] Data : multiqc_data [2018-08-04 06:28:27,835] multiqc [DEBUG ] Moving data file from '/state/partition1/job-7969896/tmp15_aZm/multiqc_data/multiqc_general_stats.txt' to '/beegfs/mk5636/logs/html/H3VL5AFXY/merged/multiqc_data' [2018-08-04 06:28:27,837] multiqc [DEBUG ] Moving data file from '/state/partition1/job-7969896/tmp15_aZm/multiqc_data/multiqc_sources.txt' to '/beegfs/mk5636/logs/html/H3VL5AFXY/merged/multiqc_data' [2018-08-04 06:28:27,839] multiqc [DEBUG ] Moving data file from '/state/partition1/job-7969896/tmp15_aZm/multiqc_data/multiqc_fastqc.txt' to '/beegfs/mk5636/logs/html/H3VL5AFXY/merged/multiqc_data' [2018-08-04 06:28:27,967] multiqc [INFO ] MultiQC complete