FastQCFastQC Report
Sat 4 Aug 2018
H3VL5AFXY_n01_p4F7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3VL5AFXY_n01_p4F7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTTTGACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCG14.0No Hit
ATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCA14.0No Hit
CCTTCTGAATGTTGTAGTCGGCCAAAGTTCTGCCATCTTCAAGTTGTTTT14.0No Hit
GAACAGAACAAGCTGGTTCTTTTTCACGAGGGCCTTCAGAATTTGAGGCA14.0No Hit
GCCCTCGCCCACAGCGGGATGCTGGAGGTGCGGCGCGGCGACGGCACCTA14.0No Hit
GCTAATACGTGCAACAAACCCCGACTTATGGAAGGGACGCATTTATTAGA14.0No Hit
GTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGT14.0No Hit
AGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGGACGCGA14.0No Hit
GCCGGGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTG14.0No Hit
GGAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGATTTGGG14.0No Hit
TTCCAGGGAACTTAGGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTA14.0No Hit
TAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTC14.0No Hit
GTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCG14.0No Hit
CAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTATACCCGGC14.0No Hit
GTCGTCGGACAAGCATATCCATTGTATTCAGCCTATCCATCATAAGAAGC14.0No Hit
GAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAGGGCTAAATAGGGGC14.0No Hit
GGGCTGGGACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAA14.0No Hit
CTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTC14.0No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA14.0No Hit
GTTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATG14.0No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATACATTTTCGGGGCTAGTTGATTC14.0No Hit
GGATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTA14.0No Hit
GGGTGAGAGCCCCGTCGTGCCCGGCCCCTGTCGCCGCCCGCGGCGCGGTC14.0No Hit
GTATGGAACTTAAAGGTCTATCATCCTCAGAATCCTCATGCTCAATTTTA14.0No Hit
CCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCT14.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers