H3KCTBGX7_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	31363243
Sequences flagged as poor quality	0
Sequence length	76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6347270	20.23792628842623	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	446381	1.4232616187044178	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	153339	0.4889130884838663	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	43735	0.13944667648049025	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTACTCT	32810	45.780094	3
TACTCTA	33915	45.019325	4
TTGTACT	32175	44.749527	1
TCTAGTT	34250	44.031326	7
TGTACTC	35160	42.70398	2
ACTCTAG	39515	41.162746	5
ACGTCTG	15350	40.79763	15
CTCTAGT	37490	40.64021	6
CAGTCAC	11885	39.791542	27
CACGTCT	16020	39.28799	14
CTAGTTG	39650	37.980988	8
CACACGT	16990	37.312786	12
TGTTACC	40295	37.122868	13
ACACGTC	17050	37.037807	13
GCACACG	17320	36.581905	11
GTTACCT	40845	36.4944	14
CCTACTA	37715	36.36396	34
CCAGTCA	13390	36.153706	26
ACCTACT	37780	35.91789	33
TACCTCT	41710	35.77104	16