H3KCTBGX7_n01_nlp7_36.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_36.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12721198
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGATCCAATCTCGTAT	27775	0.21833635479928856	TruSeq Adapter, Index 19 (97% over 37bp)
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	24572	0.1931579085554678	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	24448	0.1921831575925475	No Hit
CTGGAGTACAACTACAACAGCCACAACGTCTATATCATGGCCGACAAGCA	18040	0.14181054331518148	No Hit
CGGCAACATCCTGGGGCACAAGCTGGAGTACAACTACAACAGCCACAACG	15894	0.1249410629407702	No Hit
GGCAGACGTGCCCTCGGCCAGAAGGCTTGGGGCGCAACTTGCGTTCAAAG	14966	0.11764615250859235	No Hit
GGCGATGCCACCTACGGCAAGCTGACCCTGAAGTTCATCTGCACCACCGG	14658	0.11522499689101608	No Hit
CTCAGGTAGTGGTTGTCGGGCAGCAGCACGGGGCCGTCGCCGATGGGGGT	13920	0.10942365648266776	No Hit
CTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTG	13827	0.10869259326047752	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	4485	52.98669	48
CGTATGC	4940	48.389732	46
GTATGCC	4990	47.905052	47
TCGTATG	5650	42.246956	45
CTCGTAT	5165	41.470787	44
ACGTGAT	6215	39.081783	32
GTCACGT	6195	39.038933	29
AGTCACG	6235	38.844612	28
TCACGTG	6535	37.007687	30
GCCGTCT	6475	36.918045	51
CACGTGA	6615	36.507214	31
CAGTCAC	7115	34.236984	27
ACGTCTG	7220	33.98119	15
TCTCGTA	6505	32.443886	43
GCACACG	7555	32.42834	11
GGCAGAC	3975	32.32158	1
CACGTCT	7850	31.388039	14
TACTCTA	6855	31.302502	4
CACACGT	7915	30.864836	12
TCTAGTT	7130	30.827486	7