H3KCTBGX7_n01_nlp7_34.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_34.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12004188
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	24661	0.2054366359473877	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTAGCTATCTCGTATGC	23987	0.19982192881351077	TruSeq Adapter, Index 3 (97% over 37bp)
CTGGAGTACAACTACAACAGCCACAACGTCTATATCATGGCCGACAAGCA	21669	0.18051200131154227	No Hit
CGGCAACATCCTGGGGCACAAGCTGGAGTACAACTACAACAGCCACAACG	19982	0.1664585726248206	No Hit
GGCGATGCCACCTACGGCAAGCTGACCCTGAAGTTCATCTGCACCACCGG	17878	0.14893135628998813	No Hit
CTCAGGTAGTGGTTGTCGGGCAGCAGCACGGGGCCGTCGCCGATGGGGGT	16348	0.13618580448756717	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	16068	0.13385328520346398	No Hit
CGGATCTTGAAGTTCACCTTGATGCCGTTCTTCTGCTTGTCGGCCATGAT	13443	0.11198591691499665	No Hit
CGGCGAGCTGCACGCTGCCGTCCTCGATGTTGTGGCGGATCTTGAAGTTC	13233	0.11023652745191928	No Hit
GCGGACTTGAAGAAGTCGTGCTGCTTCATGTGGTCGGGGTAGCGGCTGAA	12332	0.10273081361271584	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	3610	48.57192	46
CGTATGC	3840	45.93628	44
GTATGCC	4060	43.61935	45
CACCTAG	4430	39.976364	31
TCGTATG	4565	38.56431	43
CTCGTAT	4460	37.824265	42
ACCTAGC	4715	37.634052	32
TCACCTA	5240	33.99719	30
TAGCTAT	5175	33.680267	35
GCCGTCT	5515	32.238625	49
CCTAGCT	5700	31.560434	33
GTCACCT	5785	30.673346	29
GCTATCT	5515	30.207846	37
ACGTCTG	6235	29.077497	15
TCTCGTA	5740	28.901915	41
GCACACG	6375	28.273996	11
AGTCACC	6330	28.253597	28
TACTCTA	5130	28.11357	4
TATCTCG	5980	27.800497	39
CACACGT	6480	27.707945	12