H3KCTBGX7_n01_nlp7_29.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_29.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10345783
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	105729	1.0219526158629078	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGGCGATCTCGTATGC	30741	0.29713555755035653	TruSeq Adapter, Index 7 (97% over 36bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25266	0.24421544507554432	No Hit
TGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTG	14981	0.1448029598146414	No Hit
GGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGT	13602	0.1314738575127663	No Hit
CGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAG	12986	0.12551974074847694	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGAC	12768	0.12341260202345244	No Hit
GTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTAT	11964	0.11564131975317865	No Hit
GTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTATCAG	11751	0.11358250989799419	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	5200	50.883644	46
CGTATGC	5420	49.140892	44
GTATGCC	5625	47.03887	45
CTCGTAT	5230	46.710163	42
TCGTATG	5820	45.16215	43
TACTCTA	19485	44.481052	4
GTACTCT	19905	43.57745	3
TCTAGTT	20020	43.30546	7
TTGTACT	20250	42.52531	1
ACTCTAG	20930	41.979137	5
CCAGGCG	6460	41.771446	33
CAGGCGA	6295	41.75436	34
TGTACTC	20900	41.468735	2
CTCTAGT	21055	41.3972	6
ACCAGGC	6915	38.9217	32
CTAGTTG	21990	38.90026	8
ATGCCGT	6920	38.085087	47
GCCGTCT	6945	37.8472	49
TAGTTGT	22850	37.803802	9
ACGTCTG	7465	36.851093	15