H3KCTBGX7_n01_nlp7_27.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_27.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10903222
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	107139	0.9826361418670555	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCACGATATCTCGTATGC	39841	0.3654057488694626	TruSeq Adapter, Index 7 (97% over 35bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25575	0.23456369135655494	No Hit
TGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTG	15631	0.143361292652759	No Hit
GGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGT	13396	0.122862764786409	No Hit
CGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAG	12919	0.11848791118808732	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGAC	11797	0.1081973750511546	No Hit
GTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTATCAG	11345	0.10405181147370933	No Hit
GTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTAT	11288	0.10352903022611115	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	5475	54.784008	46
CGTATGC	5645	53.506424	44
GTATGCC	5750	52.346508	45
CTCGTAT	5930	50.462704	42
TCGTATG	6440	46.955555	43
TACTCTA	19645	45.63356	4
GTACTCT	19940	44.888016	3
ACGATAT	6765	44.803215	35
TCTAGTT	20200	44.426456	7
TTGTACT	20170	44.222393	1
ATGCCGT	7055	42.614483	47
CACGATA	7135	42.577763	34
GCCGTCT	7245	41.303875	49
TGTACTC	21760	41.08533	2
ACTCTAG	22400	40.95885	5
ACGTCTG	7685	40.669296	15
TCTCGTA	7350	40.52316	41
CTCTAGT	22305	40.44278	6
CAGTCAC	7770	39.459007	27
CTAGTTG	22895	38.95147	8