H3KCTBGX7_n01_nlp7_25.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_25.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10518769
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	124411	1.182752468468506	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAAAAGATCTCGTATGC	59933	0.5697719951830865	TruSeq Adapter, Index 7 (97% over 37bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	26162	0.24871731663657604	No Hit
TGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTG	18931	0.17997353112327116	No Hit
GGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGT	15275	0.1452166123241227	No Hit
CGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAG	12805	0.1217347771397965	No Hit
GTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGACTATCAG	11029	0.10485067216515545	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	8625	58.43336	46
CGTATGC	8765	57.220512	44
GTATGCC	8820	57.18115	45
CTCGTAT	8740	55.021282	42
TCGTATG	9425	53.02789	43
GCCGTCT	10465	47.892036	49
ATGCCGT	10605	47.424816	47
CAGTCAC	10940	46.196537	27
TCTCGTA	10300	46.17849	41
TACTCTA	22085	45.69566	4
ACGTCTG	11370	45.650375	15
TTGTACT	22085	45.113068	1
TCTAGTT	22620	44.82599	7
GTACTCT	22515	44.82294	3
AGTCACC	11320	44.522095	28
CACGTCT	11765	44.117702	14
ACTCTAG	23315	43.825863	5
CCAGTCA	11615	43.72278	26
TCCAGTC	11760	43.68962	25
ACACGTC	11920	43.631905	13