H3KCTBGX7_n01_nlp7_15.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3KCTBGX7_n01_nlp7_15.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8419932
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	50284	0.5972019726525107	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	49515	0.5880688822665076	No Hit
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	24748	0.2939216136187323	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGA	23330	0.2770806225038397	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAG	20630	0.24501385521878324	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCATCTCGTATGC	17992	0.2136834359232355	TruSeq Adapter, Index 16 (98% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	17292	0.20536982959007272	No Hit
GCTTGATGTCGGTCTTGTAGGCGCCGGGCAGCTGCACGGGCTTCTTGGCC	15939	0.1893008162061166	No Hit
TGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGAGTTCA	12385	0.14709144919460157	No Hit
CGCGTGATGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGACTC	12100	0.14370662375895674	No Hit
TGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGACTCCTCCCTG	11077	0.1315568819320631	No Hit
CGGCCCTCGGCGCGCTCGTACTGTTCCACGATGGTGTAGTCCTCGTTGTG	9330	0.11080849584058398	No Hit
CCGTGACCCAGGACTCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTG	9327	0.11077286609915615	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	9053	0.1075186830487467	No Hit
GGGAAGTTGGTGCCGCGCAGCTTCACCTTGTAGATGAACTCGCCGTCCTG	8488	0.10080841507983675	No Hit
TCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	8431	0.10013144999270777	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	2930	48.25846	44
GTATGCC	2960	47.769356	45
TATGCCG	2955	47.6133	46
TACTCTA	9855	43.04996	4
TCTAGTT	10035	42.55177	7
ATGCCGT	3300	42.42393	47
GTACTCT	9910	42.281197	3
CTCGTAT	3045	41.838528	42
TCGTATG	3430	41.42802	43
TTGTACT	10165	40.774307	1
CCCGTCC	3555	40.26646	33
TGTACTC	10915	38.29171	2
TAGTTGT	11075	37.92275	9
ACTCTAG	13230	37.72997	5
CTCTAGT	11505	36.90634	6
CTAGTTG	11655	36.18592	8
GCCGTCT	3895	35.853184	49
CCTACTA	11380	34.876305	34
GTTACCT	11980	34.532097	14
TGTTACC	11985	34.517895	13