FastQCFastQC Report
Sat 30 Jun 2018
H3K23BGX7_n01_Del_P.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3K23BGX7_n01_Del_P.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20915599
Sequences flagged as poor quality0
Sequence length151
%GC37

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGAGG17404450.0144.62594
TAGAGGC17518650.0144.3845
AGGCAGA20661950.0144.26038
AGTAGAG17432450.0144.255683
GAGGCAG17523600.0144.247577
GGCAGAG20670100.0144.236089
AGAGGCA17569950.0144.18716
TAAGTAG17164550.0144.158131
AAGTAGA17482800.0143.917862
TAAGTAC2960050.0143.260031
GTACAGG3117650.0143.125384
AGTACAG3120450.0142.56183
TACAGGC3144450.0142.141745
AAGTACA3143550.0141.481862
CAGGCAG3200450.0141.161427
ACAGGCA3193300.0141.028616
TCCTTTC19573950.0131.66994145
GAAGTAG269450.0126.0277941
GAAGTAC171350.0121.810621
TAACTAG104700.0104.488911
Produced by FastQC (version 0.11.5)