H3HF7AFXY_n02_triple-1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3HF7AFXY_n02_triple-1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13266463
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC	156174	1.177209027002902	Illumina Single End PCR Primer 1 (100% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	136779	1.031013315304916	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCCGTA	30315	41.58021	47
GCCGTAT	31365	40.835506	48
CCGTATC	30690	40.684456	49
TCGCCGT	30850	40.530014	46
GGTCGCC	31365	40.27704	44
CGTATCA	32170	39.14056	50
GTGGTCG	32500	39.127827	42
GTCGCCG	32860	38.66852	45
CTCGGTG	32000	38.607166	38
TCTCGGT	32650	37.784565	37
ATCTCGG	32900	37.56253	36
GGTGGTC	33870	37.49208	41
TCGGTGG	34690	36.936207	39
GATCTCG	33275	36.86749	35
GTATCAT	34030	36.826126	51
AAAGGGG	21125	36.200203	66
CGGTGGT	35380	36.060074	40
AGATCTC	35255	35.124718	34
TGGTCGC	36350	34.82022	43
AGTGTAG	38035	34.25352	29