FastQCFastQC Report
Wed 30 May 2018
H2KH2AFXY_n01_p2G7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2KH2AFXY_n01_p2G7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC35

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACGA222.22222222222222No Hit
GTTTTAAGCTCAAAGCTAGTTATATGGACGACAAAGACAATTTTGCTATC111.11111111111111No Hit
GTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGC111.11111111111111No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA111.11111111111111No Hit
ATATGATTCGTTGTAGTATCCTGTTGGATCATTTGGTGCTTACTCACTTG111.11111111111111No Hit
GTCAAGACCTCGTCCTTTCTCTCTTTCCATTGCGTTTGAGAGGATGTGGC111.11111111111111No Hit
TCAAAAGATGGTTGCCAAGAACATCTTCGTTACGGTTTGCTAAATCTCGG111.11111111111111No Hit
ATTATGCTACAAATTCTGATTTTATTGTGTTTGTATTATTAGTACCCATT111.11111111111111No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)