FastQCFastQC Report
Tue 22 May 2018
000000000-BDGGG_l01_undetermined_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-BDGGG_l01_undetermined_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences347663
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAATGC352.8165127E-432.1425483
GTGTAAG300.005131766730.012671
TTAGGAC300.005142615629.9997143
ATACACA300.005142615629.99971443
CAGGAGT450.001224901224.999764
GCTCTGA500.002255912222.50951
ATCCTGT500.002261581422.4997846
TCTATCC500.002261581422.4997843
ATGGCAT550.00393131520.454356
GGGGGGT550.00393131520.454354
GGCCCCC600.00650192918.7498231
AACCTTA600.00650192918.749826
ACCATGC1150.00119891213.695528
GTGTGAG1300.003004685312.1205011
Produced by FastQC (version 0.11.5)