FastQCFastQC Report
Tue 22 May 2018
000000000-BDGGG_l01_undetermined_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-BDGGG_l01_undetermined_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences347663
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGGGG352.8141885E-432.147073
TTAAGGG352.8237107E-432.1285742
TGCACTG608.17088E-626.2496645
CTACACT450.001223896225.0032794
GTACAAG550.00392811220.4572281
TGCTCGA550.003931388320.45428310
CTACACC600.006496648318.7524594
GTATATA1004.1524693E-415.7520651
CTGCTCG1350.00399785611.6665169
GTTAAGG1900.004599759.4749271
Produced by FastQC (version 0.11.5)