FastQCFastQC Report
Wed 24 Apr 2024
HYL55DRX3_n01_PdaTF2_Pda-B_ai2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHYL55DRX3_n01_PdaTF2_Pda-B_ai2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23722455
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCTCGCGCATCTCGTAT653570.27550689842176956TruSeq Adapter, Index 8 (97% over 36bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCTCGCGCATCGCGTAT281480.11865551014850696TruSeq Adapter, Index 8 (97% over 36bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)