FastQCFastQC Report
Fri 7 Jun 2024
HYK33DRX3_n01_Nyl-2_rep3_flg22.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHYK33DRX3_n01_Nyl-2_rep3_flg22.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16049698
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCATTTCAGATATCTTGGCCTTGATTTCTTTGATATCGTCCCATTGAT328930.20494466624854873No Hit
GTCCCATTGATCAACTTGAAAATCCACAACTATTATGCTTCTTAATGCAA272180.16958574547633232No Hit
GCCGAATTTTCCTTTAAGATGTTTGACCACATCGAGATCAATCCTGTAGA206890.12890585230949517No Hit
CCGACGTTTTTCTTCGATGTGGTGAACTCTCCAACCGGAATATCGAGCCA192230.11977172405362393No Hit
CTTGATTTCTTTGATATCGTCCCATTGATCAACTTGAAAATCCACAACTA190930.11896173996544981No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)