FastQCFastQC Report
Fri 7 Jun 2024
HYK33DRX3_n01_Ge-0_rep3_flg22.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHYK33DRX3_n01_Ge-0_rep3_flg22.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25598863
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTACTTACCGAAACCTCTTCGATATTGGATGTATCATATGATATACC675920.264042977221293No Hit
CCCCTTACTTACCGAAACCTCTTCGATATTGGATGTATCATATGATATAC346410.13532241646826268No Hit
CCCACTCGTTCTTGCTCTTCCGACGCAAAGATGCACCCACGACACAAAGG323170.12624388825394317No Hit
CTCCCATTCCTCCAATTCCTGGAAACTCCTATAGATTCTTAGGAATCGGA315760.12334922844034128No Hit
CTCCGGTTTGTTTCTTTATGTCAGTTGGATCAACTTCATAGAAGATAGTC313890.12261872724581557No Hit
CCCGGGCTCGTTAGGCGACTGTTCATGAACTATCCGTCTACCCAATTTTT295870.11557935209856782No Hit
CCCGCAACGAACTTCAACACCTCCTTTGGTTCTTATACTACAACGTATAT291550.11389177714650842No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)