FastQCFastQC Report
Fri 3 May 2024
HYJMJDRX3_n02_NT_IgG_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHYJMJDRX3_n02_NT_IgG_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62209966
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGC11148041.792002265360505No Hit
GCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCG1838500.29553142658846654No Hit
GAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGACC912680.14670961241161906No Hit
AGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTTA892540.14347218900585798No Hit
ACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCGTAG667030.10722237012635563No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)