FastQCFastQC Report
Fri 3 May 2024
HYJMJDRX3_n02_KO_K4Me3_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHYJMJDRX3_n02_KO_K4Me3_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16837876
Sequences flagged as poor quality0
Sequence length51
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGC470680.2795364450955691No Hit
CAAGGTCGCTGTTCAATACATCGGATAGTTCGCGACACCGTTCGTCGGCCT399610.23732803353582127No Hit
CAAGGTCGCTGTTCAATACATCGGATCGACGCGTAAACGGTACGTCGGCCT359260.21336420341853093No Hit
ACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCGTAG310230.18424532880512956No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)