HYJKMBGXY_n01_4w-44.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HYJKMBGXY_n01_4w-44.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10903682
Sequences flagged as poor quality	0
Sequence length	75
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAAAATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGTGGGAGACATCATCGAATCAGAGATGAAC	17430	0.15985425840555512	No Hit
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGTCC	16866	0.15468169376179533	No Hit
GTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAAT	13869	0.12719556568139093	No Hit
CAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCCTCGTTGAAGACCAACAATT	13709	0.12572817145621085	No Hit
GCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCCTCGTTGAAG	13479	0.12361879225751449	No Hit
CTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGC	12846	0.11781341385414577	No Hit
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTAGATAGTAGGACTGTTTGATC	11487	0.10534973415402248	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGTCTG	2605	44.361702	15
CTCGTAT	2175	42.189415	42
CACGTCT	2785	41.865536	14
CGTATGC	2575	39.923454	44
TCGTATG	2615	39.44415	43
TATGCCG	2810	36.584324	46
CAGTCAC	3270	33.02005	27
ACTCAAT	3315	31.739016	35
ACACGTC	3960	29.791346	13
TTACCTC	3300	28.851358	15
CGCTATG	1860	28.56215	29
TCTAGTT	4055	27.987892	7
AGTCACC	3830	27.921839	28
ATGCCGT	3795	27.634579	47
GTCTGAA	4320	27.150278	17
TCGGAAG	4285	27.13065	3
CTCTAGT	3950	27.073458	6
GTCGCTA	2005	26.32438	27
ACTCTAG	3965	26.101122	5
TGTTACC	3735	25.767532	13