[2023-04-05 00:53:32,601] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2023-04-05 00:53:32,601] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2023-04-05 00:53:32,601] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-04-05 00:53:32,604] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2023-04-05 00:53:32,604] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2023-04-05 00:53:32,604] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HWYVLDRX2/merged [2023-04-05 00:53:32,864] multiqc [WARNING] MultiQC Version v1.14 now available! [2023-04-05 00:53:32,864] multiqc [INFO ] This is MultiQC v1.9 [2023-04-05 00:53:32,864] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HWYVLDRX2/merged [2023-04-05 00:53:32,864] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HWYVLDRX2/merged [2023-04-05 00:53:32,864] multiqc [INFO ] Template : default [2023-04-05 00:53:32,864] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2023-04-05 00:53:32,864] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HWYVLDRX2/merged [2023-04-05 00:53:32,865] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2023-04-05 00:53:32,865] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-31604428/tmpj99d67kg [2023-04-05 00:53:32,975] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_F08DVE_fastqc.html [2023-04-05 00:53:32,977] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded 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[2023-04-05 00:53:40,324] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_E11DVE_fastqc.html [2023-04-05 00:53:40,326] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_E11DVE_fastqc.html [2023-04-05 00:53:40,385] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_A06DVE_fastqc.html [2023-04-05 00:53:40,387] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_A06DVE_fastqc.html [2023-04-05 00:53:40,439] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_H01DVE_fastqc.html [2023-04-05 00:53:40,441] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_H01DVE_fastqc.html [2023-04-05 00:53:40,502] multiqc [DEBUG 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[2023-04-05 00:53:41,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_C04DVE_fastqc.html [2023-04-05 00:53:41,076] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_A02DVE_fastqc.html [2023-04-05 00:53:41,078] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_A02DVE_fastqc.html [2023-04-05 00:53:41,131] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_C08DVE_fastqc.html [2023-04-05 00:53:41,133] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_C08DVE_fastqc.html [2023-04-05 00:53:41,188] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_A10DVE_fastqc.html [2023-04-05 00:53:41,190] multiqc [DEBUG 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HWYVLDRX2_n02_F10DVE_fastqc.html [2023-04-05 00:53:41,778] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_G04DVE_fastqc.html [2023-04-05 00:53:41,780] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_G04DVE_fastqc.html [2023-04-05 00:53:41,833] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_B12DVE_fastqc.html [2023-04-05 00:53:41,835] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_B12DVE_fastqc.html [2023-04-05 00:53:41,896] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_E03DVE_fastqc.html [2023-04-05 00:53:41,898] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_E03DVE_fastqc.html [2023-04-05 00:53:41,952] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_B08DVE_fastqc.html [2023-04-05 00:53:41,953] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_B08DVE_fastqc.html [2023-04-05 00:53:42,012] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_E04DVE_fastqc.html [2023-04-05 00:53:42,014] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_E04DVE_fastqc.html [2023-04-05 00:53:42,066] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_F12DVE_fastqc.html [2023-04-05 00:53:42,068] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_F12DVE_fastqc.html [2023-04-05 00:53:42,122] multiqc [DEBUG 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exceeded search pattern filesize limit: HWYVLDRX2_n01_C08DVE_fastqc.html [2023-04-05 00:53:42,266] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_C08DVE_fastqc.html [2023-04-05 00:53:42,340] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_E04DVE_fastqc.html [2023-04-05 00:53:42,342] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_E04DVE_fastqc.html [2023-04-05 00:53:42,402] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_G12DVE_fastqc.html [2023-04-05 00:53:42,404] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_G12DVE_fastqc.html [2023-04-05 00:53:42,468] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_B04DVE_fastqc.html [2023-04-05 00:53:42,469] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_B04DVE_fastqc.html [2023-04-05 00:53:42,511] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_G11DVE_fastqc.html [2023-04-05 00:53:42,513] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_G11DVE_fastqc.html [2023-04-05 00:53:42,572] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_F04DVE_fastqc.html [2023-04-05 00:53:42,574] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_F04DVE_fastqc.html [2023-04-05 00:53:42,616] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_G10DVE_fastqc.html [2023-04-05 00:53:42,618] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_G10DVE_fastqc.html [2023-04-05 00:53:42,698] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_C06DVE_fastqc.html [2023-04-05 00:53:42,700] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_C06DVE_fastqc.html [2023-04-05 00:53:42,756] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_D08DVE_fastqc.html [2023-04-05 00:53:42,758] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_D08DVE_fastqc.html [2023-04-05 00:53:42,799] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_E10DVE_fastqc.html [2023-04-05 00:53:42,801] multiqc [DEBUG 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because it exceeded search pattern filesize limit: HWYVLDRX2_n02_G06DVE_fastqc.html [2023-04-05 00:53:43,075] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_D09DVE_fastqc.html [2023-04-05 00:53:43,077] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_D09DVE_fastqc.html [2023-04-05 00:53:43,119] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_F09DVE_fastqc.html [2023-04-05 00:53:43,121] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_F09DVE_fastqc.html [2023-04-05 00:53:43,162] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_H03DVE_fastqc.html [2023-04-05 00:53:43,164] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_H03DVE_fastqc.html [2023-04-05 00:53:43,221] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_E03DVE_fastqc.html [2023-04-05 00:53:43,223] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_E03DVE_fastqc.html [2023-04-05 00:53:43,274] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_F05DVE_fastqc.html [2023-04-05 00:53:43,276] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_F05DVE_fastqc.html [2023-04-05 00:53:43,324] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_B03DVE_fastqc.html [2023-04-05 00:53:43,326] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_B03DVE_fastqc.html [2023-04-05 00:53:43,414] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_F11DVE_fastqc.html [2023-04-05 00:53:43,416] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_F11DVE_fastqc.html [2023-04-05 00:53:43,476] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_E12DVE_fastqc.html [2023-04-05 00:53:43,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_E12DVE_fastqc.html [2023-04-05 00:53:43,540] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_A12DVE_fastqc.html [2023-04-05 00:53:43,541] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_A12DVE_fastqc.html [2023-04-05 00:53:43,607] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n01_B02DVE_fastqc.html [2023-04-05 00:53:43,609] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n01_B02DVE_fastqc.html [2023-04-05 00:53:43,663] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HWYVLDRX2_n02_B04DVE_fastqc.html [2023-04-05 00:53:43,665] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HWYVLDRX2_n02_B04DVE_fastqc.html [2023-04-05 00:53:44,903] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2023-04-05 00:53:44,904] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2023-04-05 00:53:44,921] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2023-04-05 00:53:44,923] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2023-04-05 00:53:44,964] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 90 samples (table) [2023-04-05 00:53:44,968] multiqc [DEBUG ] No samples found: conpair [2023-04-05 00:53:44,973] multiqc [DEBUG ] No samples found: peddy [2023-04-05 00:53:44,977] multiqc [DEBUG ] No samples found: somalier [2023-04-05 00:53:44,982] multiqc [DEBUG ] No samples found: methylQA [2023-04-05 00:53:44,989] multiqc [DEBUG ] No samples found: mosdepth [2023-04-05 00:53:44,993] multiqc [DEBUG ] No samples found: phantompeakqualtools [2023-04-05 00:53:44,997] multiqc [DEBUG ] No samples found: qualimap [2023-04-05 00:53:45,001] multiqc [DEBUG ] No samples found: preseq [2023-04-05 00:53:45,006] multiqc [DEBUG ] No samples found: quast [2023-04-05 00:53:45,010] multiqc [DEBUG ] No samples found: qorts [2023-04-05 00:53:45,014] multiqc [DEBUG ] No samples found: rna_seqc [2023-04-05 00:53:45,019] multiqc [DEBUG ] No samples found: rockhopper [2023-04-05 00:53:45,023] multiqc [DEBUG ] No samples found: rsem [2023-04-05 00:53:45,033] multiqc [DEBUG ] No samples found: rseqc [2023-04-05 00:53:45,037] multiqc [DEBUG ] No samples found: busco [2023-04-05 00:53:45,041] multiqc [DEBUG ] No samples found: goleft_indexcov [2023-04-05 00:53:45,045] multiqc [DEBUG ] No samples found: disambiguate [2023-04-05 00:53:45,050] multiqc [DEBUG ] No samples found: supernova [2023-04-05 00:53:45,062] multiqc [DEBUG ] No samples found: deeptools [2023-04-05 00:53:45,066] multiqc [DEBUG ] No samples found: sargasso [2023-04-05 00:53:45,071] multiqc [DEBUG ] No samples found: verifybamid [2023-04-05 00:53:45,075] multiqc [DEBUG ] No samples found: mirtrace [2023-04-05 00:53:45,079] multiqc [DEBUG ] No samples found: happy [2023-04-05 00:53:45,083] multiqc [DEBUG ] No samples found: mirtop [2023-04-05 00:53:45,089] multiqc [DEBUG ] No samples found: homer [2023-04-05 00:53:45,093] multiqc [DEBUG ] No samples found: macs2 [2023-04-05 00:53:45,097] multiqc [DEBUG ] No samples found: theta2 [2023-04-05 00:53:45,101] multiqc [DEBUG ] No samples found: snpeff [2023-04-05 00:53:45,107] multiqc [DEBUG ] No samples found: gatk [2023-04-05 00:53:45,111] multiqc [DEBUG ] No samples found: htseq [2023-04-05 00:53:45,115] multiqc [DEBUG ] No samples found: bcftools [2023-04-05 00:53:45,119] multiqc [DEBUG ] No samples found: featureCounts [2023-04-05 00:53:45,125] multiqc [DEBUG ] No samples found: fgbio [2023-04-05 00:53:45,137] multiqc [DEBUG ] No samples found: dragen [2023-04-05 00:53:45,141] multiqc [DEBUG ] No samples found: dedup [2023-04-05 00:53:45,145] multiqc [DEBUG ] No samples found: damageprofiler [2023-04-05 00:53:45,164] multiqc [DEBUG ] No samples found: biobambam2 [2023-04-05 00:53:45,168] multiqc [DEBUG ] No samples found: mtnucratio [2023-04-05 00:53:45,171] multiqc [DEBUG ] No samples found: picard [2023-04-05 00:53:45,175] multiqc [DEBUG ] No samples found: prokka [2023-04-05 00:53:45,179] multiqc [DEBUG ] No samples found: samblaster [2023-04-05 00:53:45,188] multiqc [DEBUG ] No samples found: samtools [2023-04-05 00:53:45,192] multiqc [DEBUG ] No samples found: sexdeterrmine [2023-04-05 00:53:45,196] multiqc [DEBUG ] No samples found: bamtools [2023-04-05 00:53:45,200] multiqc [DEBUG ] No samples found: jellyfish [2023-04-05 00:53:45,208] multiqc [DEBUG ] No samples found: vcftools [2023-04-05 00:53:45,212] multiqc [DEBUG ] No samples found: longranger [2023-04-05 00:53:45,217] multiqc [DEBUG ] No samples found: stacks [2023-04-05 00:53:45,221] multiqc [DEBUG ] No samples found: varscan2 [2023-04-05 00:53:45,233] multiqc [DEBUG ] No samples found: bbmap [2023-04-05 00:53:45,238] multiqc [DEBUG ] No samples found: bismark [2023-04-05 00:53:45,242] multiqc [DEBUG ] No samples found: biscuit [2023-04-05 00:53:45,246] multiqc [DEBUG ] No samples found: hicexplorer [2023-04-05 00:53:45,251] multiqc [DEBUG ] No samples found: hicup [2023-04-05 00:53:45,255] multiqc [DEBUG ] No samples found: hicpro [2023-04-05 00:53:45,258] multiqc [DEBUG ] No samples found: salmon [2023-04-05 00:53:45,262] multiqc [DEBUG ] No samples found: kallisto [2023-04-05 00:53:45,266] multiqc [DEBUG ] No samples found: slamdunk [2023-04-05 00:53:45,270] multiqc [DEBUG ] No samples found: star [2023-04-05 00:53:45,275] multiqc [DEBUG ] No samples found: hisat2 [2023-04-05 00:53:45,279] multiqc [DEBUG ] No samples found: tophat [2023-04-05 00:53:45,283] multiqc [DEBUG ] No samples found: bowtie2 [2023-04-05 00:53:45,286] multiqc [DEBUG ] No samples found: bowtie1 [2023-04-05 00:53:45,290] multiqc [DEBUG ] No samples found: snpsplit [2023-04-05 00:53:45,294] multiqc [DEBUG ] No samples found: kat [2023-04-05 00:53:45,298] multiqc [DEBUG ] No samples found: leehom [2023-04-05 00:53:45,302] multiqc [DEBUG ] No samples found: adapterRemoval [2023-04-05 00:53:45,306] multiqc [DEBUG ] No samples found: clipandmerge [2023-04-05 00:53:45,310] multiqc [DEBUG ] No samples found: cutadapt [2023-04-05 00:53:45,313] multiqc [DEBUG ] No samples found: flexbar [2023-04-05 00:53:45,318] multiqc [DEBUG ] No samples found: kaiju [2023-04-05 00:53:45,322] multiqc [DEBUG ] No samples found: kraken [2023-04-05 00:53:45,326] multiqc [DEBUG ] No samples found: malt [2023-04-05 00:53:45,330] multiqc [DEBUG ] No samples found: trimmomatic [2023-04-05 00:53:45,334] multiqc [DEBUG ] No samples found: sickle [2023-04-05 00:53:45,338] multiqc [DEBUG ] No samples found: skewer [2023-04-05 00:53:45,341] multiqc [DEBUG ] No samples found: sortmerna [2023-04-05 00:53:45,345] multiqc [DEBUG ] No samples found: biobloomtools [2023-04-05 00:53:45,349] multiqc [DEBUG ] No samples found: fastq_screen [2023-04-05 00:53:45,353] multiqc [DEBUG ] No samples found: afterqc [2023-04-05 00:53:45,357] multiqc [DEBUG ] No samples found: fastp [2023-04-05 00:53:53,946] multiqc.modules.fastqc.fastqc [INFO ] Found 180 reports [2023-04-05 00:54:08,537] multiqc [DEBUG ] No samples found: pycoqc [2023-04-05 00:54:08,542] multiqc [DEBUG ] No samples found: minionqc [2023-04-05 00:54:08,547] multiqc [DEBUG ] No samples found: multivcfanalyzer [2023-04-05 00:54:08,551] multiqc [DEBUG ] No samples found: clusterflow [2023-04-05 00:54:08,555] multiqc [DEBUG ] No samples found: bcl2fastq [2023-04-05 00:54:08,559] multiqc [DEBUG ] No samples found: interop [2023-04-05 00:54:08,564] multiqc [DEBUG ] No samples found: ivar [2023-04-05 00:54:08,568] multiqc [DEBUG ] No samples found: flash [2023-04-05 00:54:08,572] multiqc [DEBUG ] No samples found: seqyclean [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2023-04-05 00:54:08,572] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2023-04-05 00:54:08,573] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2023-04-05 00:54:08,791] multiqc [INFO ] Compressing plot data [2023-04-05 00:54:08,855] multiqc [INFO ] Report : multiqc_report.html [2023-04-05 00:54:08,855] multiqc [INFO ] Data : multiqc_data [2023-04-05 00:54:08,855] multiqc [DEBUG ] Moving data file from '/state/partition1/job-31604428/tmpj99d67kg/multiqc_data' to '/scratch/gencore/logs/html/HWYVLDRX2/merged/multiqc_data' [2023-04-05 00:54:08,987] multiqc [INFO ] MultiQC complete