HWVCHAFXY_n02_14-0.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HWVCHAFXY_n02_14-0.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9725817
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	410139	4.217013336771605	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAAGGGG	13390	0.0	9.72525	70
AAAAGGG	18935	0.0	9.225155	70
AAGGGGG	14360	0.0	8.678287	70
GGGGAAA	24410	0.0	8.244763	58
GGGAAAA	26090	0.0	8.169861	59
GGGGGAA	28745	0.0	7.5005703	57
AGGGGGG	35530	0.0	7.3856225	1
AAAAAGG	28930	0.0	6.8970737	70
GGAAAAA	34710	0.0	6.776058	60
AAGAGGG	8050	0.0	6.4358253	70
AGAGGGG	8590	0.0	5.705232	70
CCCACAC	3145	0.0	5.6751947	8
AAAAAAG	46675	0.0	5.5272098	69
CACACCC	3175	0.0	5.5123644	4
GAAAAAA	55440	0.0	5.4986672	61
GGGGGGA	59225	0.0	5.2596984	57
AAAAAAA	245595	0.0	5.1430254	65