Sample File type per_base_n_content kmer_content Filename per_sequence_gc_content basic_statistics Total Sequences sequence_duplication_levels sequence_length_distribution Sequence length overrepresented_sequences avg_sequence_length per_base_sequence_content per_base_sequence_quality per_sequence_quality_scores adapter_content %GC per_tile_sequence_quality Sequences flagged as poor quality Encoding total_deduplicated_percentage HWV57AFXX_n01_ah119c3htop2-0318 Conventional base calls pass fail HWV57AFXX_n01_ah119c3htop2-0318.fastq.gz warn pass 6431070.0 pass pass 100.0 warn 100.0 warn pass pass pass 40.0 pass 0.0 Sanger / Illumina 1.9 73.8902762316711 HWV57AFXX_n01_ah119i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah119i3h-0318.fastq.gz pass pass 6461987.0 pass pass 100.0 pass 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 78.43285900195947 HWV57AFXX_n01_ah3988c3hflag-0318 Conventional base calls pass fail HWV57AFXX_n01_ah3988c3hflag-0318.fastq.gz pass pass 8160185.0 pass pass 100.0 pass 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 76.75516348562057 HWV57AFXX_n01_ah3988i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah3988i3h-0318.fastq.gz pass pass 7489384.0 pass pass 100.0 pass 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 77.38964196407586 HWV57AFXX_n01_ah5184c3htop2-spikein-0318 Conventional base calls pass fail HWV57AFXX_n01_ah5184c3htop2-spikein-0318.fastq.gz pass pass 6703398.0 pass pass 100.0 warn 100.0 warn pass pass pass 40.0 pass 0.0 Sanger / Illumina 1.9 74.48212407021745 HWV57AFXX_n01_ah5184i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah5184i3h-0318.fastq.gz pass pass 8292050.0 pass pass 100.0 pass 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 76.69747484938627 HWV57AFXX_n01_ah6408a-0318 Conventional base calls pass fail HWV57AFXX_n01_ah6408a-0318.fastq.gz pass pass 8071917.0 pass pass 100.0 warn 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 76.94420751860599 HWV57AFXX_n01_ah6408i-0318 Conventional base calls pass fail HWV57AFXX_n01_ah6408i-0318.fastq.gz pass pass 5899982.0 pass pass 100.0 warn 100.0 warn pass pass pass 40.0 pass 0.0 Sanger / Illumina 1.9 70.26754768442746 HWV57AFXX_n01_ah7797c0htop2-spikein-0318 Conventional base calls pass fail HWV57AFXX_n01_ah7797c0htop2-spikein-0318.fastq.gz pass pass 7955063.0 pass pass 100.0 pass 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 74.73087023170733 HWV57AFXX_n01_ah7797c3htop2-spikein-0318 Conventional base calls pass fail HWV57AFXX_n01_ah7797c3htop2-spikein-0318.fastq.gz pass pass 6973530.0 pass pass 100.0 pass 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 75.29220126891943 HWV57AFXX_n01_ah7797i0h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah7797i0h-0318.fastq.gz pass pass 7131772.0 pass pass 100.0 pass 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 78.25299499187697 HWV57AFXX_n01_ah7797i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah7797i3h-0318.fastq.gz pass pass 5726906.0 pass pass 100.0 pass 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 81.17810586786402 HWV57AFXX_n01_ah8867a-0318 Conventional base calls pass fail HWV57AFXX_n01_ah8867a-0318.fastq.gz pass pass 6997058.0 pass pass 100.0 warn 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 78.91325540694066 HWV57AFXX_n01_ah8867b-0318 Conventional base calls pass fail HWV57AFXX_n01_ah8867b-0318.fastq.gz pass pass 6416358.0 pass pass 100.0 warn 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 79.08377747873627 HWV57AFXX_n01_ah9012c3hflag-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9012c3hflag-0318.fastq.gz pass pass 7140521.0 pass pass 100.0 warn 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 78.05600854917128 HWV57AFXX_n01_ah9012i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9012i3h-0318.fastq.gz pass pass 7068550.0 pass pass 100.0 warn 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 76.7576529305084 HWV57AFXX_n01_ah9621c3hflag-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9621c3hflag-0318.fastq.gz pass pass 7602897.0 pass pass 100.0 pass 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 75.50686823056388 HWV57AFXX_n01_ah9621i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9621i3h-0318.fastq.gz pass pass 7308027.0 pass pass 100.0 warn 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 78.06861813329006 HWV57AFXX_n01_ah9624c3hflag-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9624c3hflag-0318.fastq.gz pass pass 6613915.0 pass pass 100.0 pass 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 77.55676512635675 HWV57AFXX_n01_ah9624i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9624i3h-0318.fastq.gz pass pass 7970825.0 pass pass 100.0 pass 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 77.49583854661823 HWV57AFXX_n01_ah9767c3htop2-spikein-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9767c3htop2-spikein-0318.fastq.gz pass pass 5981760.0 pass pass 100.0 warn 100.0 warn pass pass pass 40.0 pass 0.0 Sanger / Illumina 1.9 75.04090712808285 HWV57AFXX_n01_ah9767i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9767i3h-0318.fastq.gz pass pass 6709235.0 pass pass 100.0 warn 100.0 warn pass pass pass 39.0 pass 0.0 Sanger / Illumina 1.9 79.11635590041487 HWV57AFXX_n01_ah9847c3hmyc-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9847c3hmyc-0318.fastq.gz pass pass 6115367.0 pass pass 100.0 warn 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 75.60045507508869 HWV57AFXX_n01_ah9847i3h-0318 Conventional base calls pass fail HWV57AFXX_n01_ah9847i3h-0318.fastq.gz pass pass 6903939.0 pass pass 100.0 warn 100.0 warn pass pass pass 38.0 pass 0.0 Sanger / Illumina 1.9 79.70220352670371