Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HWV52AFXY_n01_EFS_S1 pass 0.0 fail 60.0 Sanger / Illumina 1.9 fail pass pass 60.0 Conventional base calls pass warn 18053575.0 pass fail fail 46.0 13.4430510359 HWV52AFXY_n01_EFS_S1.fastq.gz pass pass HWV52AFXY_n01_EFS_S2 pass 0.0 fail 60.0 Sanger / Illumina 1.9 fail pass pass 60.0 Conventional base calls pass fail 19060032.0 pass fail fail 47.0 13.5574502907 HWV52AFXY_n01_EFS_S2.fastq.gz pass pass HWV52AFXY_n01_EFS_S3 pass 0.0 fail 60.0 Sanger / Illumina 1.9 fail pass pass 60.0 Conventional base calls pass fail 14521772.0 pass fail fail 47.0 14.9417927824 HWV52AFXY_n01_EFS_S3.fastq.gz pass pass HWV52AFXY_n01_EFS_S4 pass 0.0 fail 60.0 Sanger / Illumina 1.9 fail pass pass 60.0 Conventional base calls pass fail 27642765.0 pass fail fail 48.0 14.1903251094 HWV52AFXY_n01_EFS_S4.fastq.gz pass pass HWV52AFXY_n01_EFS_S5 pass 0.0 fail 60.0 Sanger / Illumina 1.9 fail pass pass 60.0 Conventional base calls pass fail 14785011.0 pass fail fail 47.0 14.7990011772 HWV52AFXY_n01_EFS_S5.fastq.gz pass pass HWV52AFXY_n01_EFS_S6 pass 0.0 fail 60.0 Sanger / Illumina 1.9 fail pass pass 60.0 Conventional base calls pass fail 13966935.0 pass fail fail 47.0 14.5483840174 HWV52AFXY_n01_EFS_S6.fastq.gz pass pass HWV52AFXY_n01_undetermined pass 0.0 fail 60.0 Sanger / Illumina 1.9 fail pass pass 60.0 Conventional base calls pass fail 26909463.0 pass fail fail 53.0 18.9496144868 HWV52AFXY_n01_undetermined.fastq.gz pass pass HWV52AFXY_n02_EFS_S1 fail 0.0 fail 90.0 Sanger / Illumina 1.9 fail pass pass 90.0 Conventional base calls pass fail 18053575.0 pass fail warn 48.0 8.28094519072 HWV52AFXY_n02_EFS_S1.fastq.gz pass pass HWV52AFXY_n02_EFS_S2 fail 0.0 fail 90.0 Sanger / Illumina 1.9 fail pass pass 90.0 Conventional base calls pass fail 19060032.0 pass fail warn 48.0 6.11352437583 HWV52AFXY_n02_EFS_S2.fastq.gz pass pass HWV52AFXY_n02_EFS_S3 fail 0.0 fail 90.0 Sanger / Illumina 1.9 fail pass pass 90.0 Conventional base calls pass fail 14521772.0 pass fail fail 48.0 6.32344057347 HWV52AFXY_n02_EFS_S3.fastq.gz pass pass HWV52AFXY_n02_EFS_S4 fail 0.0 fail 90.0 Sanger / Illumina 1.9 fail pass pass 90.0 Conventional base calls pass fail 27642765.0 pass fail fail 49.0 4.95629850667 HWV52AFXY_n02_EFS_S4.fastq.gz warn pass HWV52AFXY_n02_EFS_S5 fail 0.0 fail 90.0 Sanger / Illumina 1.9 fail pass pass 90.0 Conventional base calls pass fail 14785011.0 pass fail fail 48.0 5.40071975377 HWV52AFXY_n02_EFS_S5.fastq.gz warn pass HWV52AFXY_n02_EFS_S6 fail 0.0 fail 90.0 Sanger / Illumina 1.9 fail pass pass 90.0 Conventional base calls pass fail 13966935.0 pass fail fail 48.0 5.14685185916 HWV52AFXY_n02_EFS_S6.fastq.gz warn pass HWV52AFXY_n02_undetermined pass 0.0 fail 90.0 Sanger / Illumina 1.9 fail pass pass 90.0 Conventional base calls pass fail 26909463.0 pass fail fail 48.0 20.9481668267 HWV52AFXY_n02_undetermined.fastq.gz pass pass