FastQCFastQC Report
Tue 30 Aug 2016
HWT5WBCXX_l02n01_mesp_dnfgfr_10hpf_31_march.351000000679b7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWT5WBCXX_l02n01_mesp_dnfgfr_10hpf_31_march.351000000679b7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4148
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATGGCGACCATCCAAAGGATAAACATCATAGGCAGTCGGGAGGGTAGTCG50.1205400192864031No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)