HWNG7BGX3_n01_ko160_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HWNG7BGX3_n01_ko160_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8692879
Sequences flagged as poor quality	0
Sequence length	75
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG	31365	0.36081256854029603	TruSeq Adapter, Index 16 (98% over 63bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCCGTCC	4380	54.586243	33
TATGCCG	4455	53.82031	46
CGTATGC	4570	52.46627	44
GTATGCC	4835	49.44767	45
ATGCCGT	4860	49.2643	47
TCGTATG	4945	48.487534	43
CTCGTAT	5265	44.098957	42
CCGTCCA	5515	43.352264	34
CACCCGT	5625	42.62691	31
TGCCGTC	5640	42.51232	48
ACCCGTC	5675	42.311893	32
GCCGTCT	5850	40.927265	49
CGTCCAT	5705	40.516857	35
TCACCCG	5985	40.17864	30
ACGTCTG	6160	39.82016	15
GCACACG	6250	39.5784	11
GTCACCC	6140	39.557686	29
CACACGT	6435	38.172714	12
TCTCGTA	6075	37.196888	41
ACACGTC	6600	37.166122	13