FastQCFastQC Report
Wed 5 Jan 2022
HWN2LBGXK_n02_AA36__.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWN2LBGXK_n02_AA36__.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7051693
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC1724362.44531348712997No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG1154781.6375925611055386No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTC224250.31800873917795347No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTAT164960.23392963930789384No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG144150.20441899555184834No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTAT112680.1597914146290827No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTC110850.15719629314549002No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)