FastQCFastQC Report
Wed 5 Jan 2022
HWN2LBGXK_n02_AA26__.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWN2LBGXK_n02_AA26__.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8485819
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC766190.9029063664921442No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG544570.6417412391190526No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG167390.19725850857766353No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTAT117540.13851344224994666No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTC100430.11835039140005224No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTAT100270.11816184153821807No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTATACACAT97710.11514504374887091No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTATACACAT93240.10987743198387805No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)