FastQCFastQC Report
Tue 18 May 2021
HWMTKAFX2_n01_ChIP-zmm16.tassel-line15.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWMTKAFX2_n01_ChIP-zmm16.tassel-line15.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15653580
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCACCGGATCGGGGGGGG341720.21830150035966212TruSeq Adapter, Index 7 (97% over 35bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG303000.19356594465930477No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)