FastQCFastQC Report
Fri 16 Aug 2024
HWMMFDMXY_n01_H_W_B_q.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWMMFDMXY_n01_H_W_B_q.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171595220
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATACAGGCAACACGCAGATATAGGTGCGACGTGAACAGTGAGCTG4291300.250082723749531No Hit
GTATATATATATACATGAGAAGAACGGCATAGTGCGTGTTTATGCTTAAA2308800.13454920247778465No Hit
GAGATATATAGCAAAGAGATACTTTTGAGCAATGTTTCAGGGCACAGTAT1802440.10504022198287342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)