FastQCFastQC Report
Thu 23 Dec 2021
HWMKGBGXK_n02_AA32__.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWMKGBGXK_n02_AA32__.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2849771
Sequences flagged as poor quality0
Sequence length76
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTATACACAT481311.688942725573388No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTATACACATCTGACG383451.3455467123498694No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTAT332591.1670762317393222No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC276540.9703937614636403No Hit
GCCTAAGCCTAAGCCTAAGCCCTGTCTCTTATACACATCTGACGCTGCCG198180.695424299005078No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTATACACATCTGACG195110.6846515035769541No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTC168030.5896263243607995No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTAT156870.5504652829999322No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG135160.474283723148281No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTATACACAT103160.3619939988160452No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59960.21040287096752686No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTC51700.1814180858742685No Hit
GGCTTAGGCTTAGGCTTAGGCCTGTCTCTTATACACATCTGACGCTGCCG41820.14674863348669068No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)