FastQCFastQC Report
Thu 23 Dec 2021
HWMKGBGXK_n02_AA30__.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWMKGBGXK_n02_AA30__.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4620141
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC467691.0122851228999288No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG334900.724869652246544No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTAT115510.2500140147237931No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG110350.2388455244114844No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTATACACAT93540.20246135345219984No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTAT87370.18910678267178427No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTC83950.18170441118571923No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTATACACAT70780.15319878765604772No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTC64040.1386104882946213No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)