FastQCFastQC Report
Thu 23 Dec 2021
HWMKGBGXK_n01_AA37__.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWMKGBGXK_n01_AA37__.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3263188
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG464311.4228723567259993No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC362781.111734904639267No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTC35960.11019898332550868No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)