FastQCFastQC Report
Thu 23 Dec 2021
HWMKGBGXK_n01_AA34__.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWMKGBGXK_n01_AA34__.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1796190
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG273141.520663181511978No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC183081.0192685629025884No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTATACACAT94570.5265033209181657No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTAT79600.4431602447402557No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTAT70750.39388928788157157No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTATACACAT63660.35441684899704373No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTC45680.2543160801474232No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTATACACATCTCCGA39690.22096771499674311No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTC32390.18032613476302617No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTATACACATCTCCGA31180.17358965365579365No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)