FastQCFastQC Report
Thu 23 Dec 2021
HWMKGBGXK_n01_AA33__.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWMKGBGXK_n01_AA33__.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1517727
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG92470.6092663568612801No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC35180.2317939919366263No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTC20140.13269843654359448No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTAT17320.114118019907401No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)