FastQCFastQC Report
Thu 23 Dec 2021
HWMKGBGXK_n01_AA30__.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHWMKGBGXK_n01_AA30__.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4620141
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG465961.0085406484347554No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC336870.7291335913774061No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTAT116500.25215680646975924No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTCTCTTATACACAT95440.2065737820555693No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTAT87220.18878211725572877No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCCTGTC85040.18406364654238908No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTCTCTTATACACAT70180.1519001259918258No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCTGTC63800.13809102362893252No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)