HWKFWAFXX_n01_vs8_180118.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HWKFWAFXX_n01_vs8_180118.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8418829
Sequences flagged as poor quality	0
Sequence length	50
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTAT	422510	5.018631451001084	TruSeq Adapter, Index 14 (97% over 44bp)
AATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTAT	25109	0.29824812928258787	TruSeq Adapter, Index 14 (97% over 41bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTAGCTCGTAT	16401	0.19481331667385096	TruSeq Adapter, Index 14 (97% over 41bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	10026	0.11909019651070239	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCGCGTAT	9826	0.11671456921146633	TruSeq Adapter, Index 14 (97% over 45bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	52225	43.46482	1
GCACACG	57465	43.29219	11
CACACGT	57730	43.11201	12
ACACGTC	57770	43.074543	13
TCGGAAG	57955	43.024273	3
CACGTCT	57760	43.02106	14
ACGTCTG	57735	42.986347	15
AGCACAC	57950	42.9567	10
GAGCACA	57975	42.949043	9
CGTCTGA	57645	42.943302	16
AGAGCAC	58335	42.74433	8
ATCGGAA	58595	42.63824	2
CTCGTAT	52865	42.60647	44
CGGAAGA	58610	42.543705	4
TCCAGTC	57675	42.43398	25
GAACTCC	57950	42.417652	21
GTTCCGT	56520	42.392258	35
CCGTATC	52525	42.33337	38
GTCACAG	57830	42.320248	29
CAGTCAC	57860	42.31351	27