HWJ22BGXC_n02_2588_d6_rep2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HWJ22BGXC_n02_2588_d6_rep2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3483481
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATATTCAGCATGGAAAGAATAAAAGAACTTCGGAATCTAATGTCGCA	9474	0.2719693318264116	No Hit
GTATTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAG	7476	0.21461291162489476	No Hit
CTTTTAAGGCCGTGTTTGAAGAGTCGACAGACGCATTTGAAAAAAAGACG	6672	0.1915325503426027	No Hit
GCTATAACTATTTTAATGCATGTGTCAGGAAGGAGTTGAACCAAGACGCA	6431	0.18461418334131866	No Hit
TTCCAGTACTGGTCTAAGAGATGATCTTCTTGAAAATTTGCAGACCTATC	5577	0.16009847620813777	No Hit
ACTCTATGCTGACAAAATGACTGTCGTCAGCATCCACAGCATTCTGCTGT	5210	0.14956303766261392	No Hit
TTCCTATACAGTTTAACTGCTTTGTCCATGTTATTTGGGTCTCCATTCCC	4778	0.1371616495109346	No Hit
GTACTGGAACTAGGATGAGTCCCAATGGCTCTCATTGCCTGCACCATCTG	4689	0.13460673389635253	No Hit
TTTTTAAACTATTCAGTATTAATTGATGGCCATCCGAATTCTTTTGGTCG	4435	0.12731517697383737	No Hit
GAGCAAAAGCAGGTCAATTATATTCAGCATGGAAAGAATAAAAGAACTTC	4171	0.11973655088114447	No Hit
GTATAGGAAACTTAAGAGGGAGATAACGTTCCATGGGGCCAAAGAAATAG	3689	0.10589981687857633	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGAA	935	77.60098	1
AGCGAAA	1620	65.838684	1
GCGAAAG	1950	55.385983	2
CGAAAGC	2080	52.241333	3
AAGGTCG	720	46.284607	9
CAAAAGC	8800	46.179348	4
GCAAAAG	9105	44.077415	3
AGCAGGT	6110	38.060005	8
CTATTCA	2720	35.95639	9
GTAGAAA	3090	35.92624	1
CTATAAC	3710	34.5818	2
AAGCAGG	14185	33.909298	7
ATTCAGC	4770	33.713856	6
ATTATAT	5505	33.082264	1
GCTATAA	3965	32.38985	1
ACTATTC	2985	32.278423	8
CAGTACG	1380	32.023	9
TAACTAT	3965	31.97146	5
TTATATT	5830	30.461111	2
GAGCAAA	14435	30.209011	1