HWCLJBGX9_n02_190222-lib1b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HWCLJBGX9_n02_190222-lib1b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44798115
Sequences flagged as poor quality	0
Sequence length	49
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGGTCGAGTGCCTCACA	356687	0.796209840525656	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	129837	0.2898269268695792	No Hit
GCAGTGGTATCAACGCAGAGTACATGGGGGCGGTCGAGTGCCTCACAGT	67037	0.14964245705427562	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCGGTCGTGAATTCCGC	53219	0.11879740922134782	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGGGCGGTCGAGTGCCTCACAG	50377	0.11245339229117117	No Hit
GCGTAATTTTTTTGGAGAGTTCATATCGATAAAAAAGATTGCGACCTCG	45597	0.10178330048038853	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	138990	38.967285	1
AGCAGTG	150565	35.867928	2
GCAGTGG	173140	31.179886	3
CAGTGGT	173935	30.958681	4
AGTGGTA	176560	30.522287	5
TGGTATC	181995	29.552652	7
GTGGTAT	182465	29.53026	6
GGTATCA	185560	29.03239	8
TCAACGC	190165	28.140745	12
CAACGCA	191190	28.031603	13
AACGCAG	193670	27.723616	14
ATCAACG	193525	27.718477	11
GCAGAGT	193480	27.704012	17
CGCAGAG	194450	27.687084	16
AGAGTAC	193685	27.677938	19
ACGCAGA	194280	27.587982	15
CAGAGTA	196410	27.345354	18
TACATGG	194185	27.263578	23
ACATGGG	194085	27.173008	24
GTACATG	195850	27.131527	22