HW7CJAFXY_n01_SG162_r1_col_B_L.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HW7CJAFXY_n01_SG162_r1_col_B_L.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10117656
Sequences flagged as poor quality	0
Sequence length	76
%GC	37

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGCCGT	1165	0.0	10.814932	49
TATGCCG	1230	0.0	9.958871	48
GCCGTCT	1235	0.0	9.635308	51
TGCCGTC	1245	0.0	9.557774	50
GTATGCC	1430	0.0	8.810766	47
CGTATGC	1410	0.0	8.439311	46
ACGGGGG	435	0.0014428939	8.045711	51
ACCCCCG	485	4.796016E-4	7.937959	65
CTCGTAT	2215	0.0	7.4262795	44
CGCTCAT	1720	0.0	7.3251934	34
CCGCTCA	2035	0.0	6.53528	33
AGGGGGG	1535	1.10958354E-10	6.3891735	1
GCGTCGG	765	0.0014022521	5.9474273	46
CGGACTG	1215	2.6249945E-6	5.7640314	6
ACCGCTC	2200	1.8189894E-12	5.7269697	32
TCGTATG	2430	0.0	5.6170144	45
CACCGCT	2370	0.0	5.6115174	31
CCGTCTT	2485	0.0	5.4927754	52
CGCGTAA	770	0.009763633	5.454257	30